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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55939

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MMP16 HGNC:7162 (HGNC)
4325 (Entrez Gene)
602262 (OMIM)
Chr8 q21.3 Chr8:88037232-88327488 (-)
GRCh38
P51512 (UniProt | EBI)
NM_005941 (RefSeq)
mouse Mmp16 MGI:1276107 (MGI)
17389 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 7.08 cM Chr4:17852893-18119145 (+)
GRCm38
OTTMUSG00000004650 (VEGA)
OTTMUSP00000004975 (VEGA)
OTTMUST00000010497 (VEGA)
rat Mmp16 65205 (Entrez Gene)
Chr5 q13 O35548 (UniProt | EBI)
NM_080776 (RefSeq)
chimpanzee MMP16 736322 (Entrez Gene)
Chr8 XP_001136497 (RefSeq)
rhesus macaque MMP16 695120 (Entrez Gene)
Chr8 XP_001084206 (RefSeq)
cattle MMP16 282886 (Entrez Gene)
Chr14 NP_001179551 (RefSeq)
NM_001192622 (RefSeq)
dog MMP16 487036 (Entrez Gene)
Chr29 XP_544165 (RefSeq)
chicken MMP16 396116 (Entrez Gene)
Chr2 NP_990528 (RefSeq)
NM_205197 (RefSeq)
western clawed frog mmp16 548746 (Entrez Gene)
ChrUN NP_001015992 (RefSeq)
NM_001015992 (RefSeq)
zebrafish mmp16b 572034 (Entrez Gene)
Chr2 XP_700781 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory