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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55922

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GPC6 HGNC:4454 (HGNC)
10082 (Entrez Gene)
604404 (OMIM)
Chr13 q32 Chr13:93226825-94408020 (+)
GRCh38
Omodysplasia 1; OMOD1
Q9Y625 (UniProt | EBI)
NM_005708 (RefSeq)
mouse Gpc6 MGI:1346322 (MGI)
23888 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 60.34 cM Chr14:116925297-117979529 (+)
GRCm38
OTTMUSG00000018004 (VEGA)
OTTMUSP00000044609 (VEGA)
OTTMUST00000083121 (VEGA)
rat LOC691984 691984 (Entrez Gene)
Chr15 q24 XP_001077762 (RefSeq)
chimpanzee GPC6 452621 (Entrez Gene)
Chr13 XP_509698 (RefSeq)
dog GPC6 476962 (Entrez Gene)
Chr22 XP_534162 (RefSeq)
chicken GPC6 418794 (Entrez Gene)
Chr1 XP_416989 (RefSeq)
western clawed frog gpc6 100491173 (Entrez Gene)
ChrUN XP_002939330 (RefSeq)
zebrafish zgc:171629 571904 (Entrez Gene)
ChrUN NP_001103189 (RefSeq)
NM_001109719 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory