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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GPC6 HGNC:4454 (HGNC)
10082 (Entrez Gene)
604404 (OMIM)
Glypican 6 (MyGene.info)
HGNC homology
Chr13 q31.3-q32.1 Chr13:93226825-94408020 (+)
Q9Y625 (UniProt | EBI)
NM_005708 (RefSeq)
mouse Gpc6 MGI:1346322 (MGI)
23888 (Entrez Gene)
Gene Tree
HGNC homology
Chr14 60.34 cM Chr14:116925297-117979529 (+)
OTTMUSG00000018004 (VEGA)
OTTMUSP00000044609 (VEGA)
OTTMUST00000083121 (VEGA)
rat Gpc6 691984 (Entrez Gene)
Chr15 q24 XP_003752892 (RefSeq)
chimpanzee GPC6 452621 (Entrez Gene)
Chr13 XP_509698 (RefSeq)
dog GPC6 476962 (Entrez Gene)
Chr22 XP_005634075 (RefSeq)
chicken GPC6 418794 (Entrez Gene)
Chr1 XP_015130158 (RefSeq)
zebrafish gpc6a 571904 (Entrez Gene)
Chr1 NP_001103189 (RefSeq)
NM_001109719 (RefSeq)
frog, western clawed gpc6 100491173 (Entrez Gene)
Chr2 XP_017947142 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory