About   Help   FAQ
HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5590

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human DDX54 HGNC:20084 (HGNC)
79039 (Entrez Gene)
611665 (OMIM)
HGNC homology
Chr12 q24.13 Chr12:113157173-113185479 (-)
GRCh38.p7
Q8TDD1 (UniProt | EBI)
NM_024072 (RefSeq)
mouse Ddx54 MGI:1919240 (MGI)
71990 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 60.63 cM Chr5:120613107-120628592 (+)
GRCm38
71990 (NCBI Gene Model)
Q8K4L0 (UniProt | EBI)
NM_028041 (RefSeq)
rat Ddx54 360815 (Entrez Gene)
Chr12 q16 NP_001178477 (RefSeq)
NM_001191548 (RefSeq)
chimpanzee DDX54 739545 (Entrez Gene)
Chr12 XP_009424577 (RefSeq)
cattle DDX54 535152 (Entrez Gene)
Chr17 XP_005218062 (RefSeq)
dog DDX54 486279 (Entrez Gene)
Chr26 XP_022266479 (RefSeq)
chicken DDX54 416992 (Entrez Gene)
Chr15 XP_003642273 (RefSeq)
zebrafish ddx54 286777 (Entrez Gene)
Chr5 NP_775375 (RefSeq)
NM_173268 (RefSeq)
frog, western clawed ddx54 733994 (Entrez Gene)
Chr1 XP_002934380 (RefSeq)
macaque, rhesus DDX54 712763 (Entrez Gene)
Chr11 XP_015008364 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/18/2019
MGI 6.14
The Jackson Laboratory