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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55879

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL8A2 HGNC:2216 (HGNC)
1296 (Entrez Gene)
120252 (OMIM)
Chr1 p34.2 Chr1:36095239-36125704 (-)
GRCh38
Corneal Dystrophy, Fuchs Endothelial, 1; FECD1
Corneal Dystrophy, Posterior Polymorphous, 2; PPCD2
P25067 (UniProt | EBI)
NM_005202 (RefSeq)
mouse Col8a2 MGI:88464 (MGI)
329941 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 60.29 cM Chr4:126286793-126314330 (+)
GRCm38
Corneal Dystrophy, Fuchs Endothelial, 1; FECD1
OTTMUSG00000009356 (VEGA)
OTTMUSP00000009753 (VEGA)
OTTMUST00000021325 (VEGA)
rat Col8a2 313592 (Entrez Gene)
Chr5 q36 XP_001057987 (RefSeq)
chimpanzee COL8A2 747856 (Entrez Gene)
Chr1 XP_001158595 (RefSeq)
rhesus macaque COL8A2 713447 (Entrez Gene)
Chr1 XP_001102808 (RefSeq)
cattle COL8A2 539415 (Entrez Gene)
Chr3 NP_001192594 (RefSeq)
NM_001205665 (RefSeq)
dog COL8A2 482478 (Entrez Gene)
Chr15 XP_003639551 (RefSeq)
chicken COL8A2 428221 (Entrez Gene)
Chr23 XP_425780 (RefSeq)
western clawed frog col8a2 100486732 (Entrez Gene)
ChrUN XP_002936271 (RefSeq)
zebrafish col8a2 794479 (Entrez Gene)
Chr19 NP_001076370 (RefSeq)
NM_001082901 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory