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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55838

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KDM5D HGNC:11115 (HGNC)
8284 (Entrez Gene)
426000 (OMIM)
ChrY q11 ChrY:19703865-19744939 (-)
GRCh38
Spermatogenic Failure, Y-Linked, 2; SPGFY2
Q9BY66 (UniProt | EBI)
NM_004653 (RefSeq)
mouse Kdm5d MGI:99780 (MGI)
20592 (Entrez Gene)
Gene Tree
VISTA-Point
ChrY p ChrY:897788-956786 (+)
GRCm38
OTTMUSG00000045277 (VEGA)
OTTMUSP00000066308 (VEGA)
OTTMUST00000118913 (VEGA)
chimpanzee KDM5D 449032 (Entrez Gene)
ChrY Q5XUN4 (UniProt | EBI)
NM_001008975 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory