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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5578

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GMPPB HGNC:22932 (HGNC)
29925 (Entrez Gene)
615320 (OMIM)
Chr3 p21.31 Chr3:49721476-49723974 (-)
GRCh38
Muscular Dystrophy-Dystroglycanopathy (congenital with Brain and Eye Anomalies), Type A, 14; MDDGA14
Muscular Dystrophy-Dystroglycanopathy (congenital with Mental Retardation), Type B, 14; MDDGB14
Muscular Dystrophy-Dystroglycanopathy (limb-Girdle), Type C, 14; MDDGC14
Q9Y5P6 (UniProt | EBI)
NM_013334 (RefSeq)
mouse Gmppb MGI:2660880 (MGI)
331026 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 59.07 cM Chr9:108049269-108052801 (+)
GRCm38
OTTMUSG00000016525 (VEGA)
OTTMUSP00000017806 (VEGA)
OTTMUST00000039936 (VEGA)
rat Gmppb 363145 (Entrez Gene)
Chr8 q32 NP_001102251 (RefSeq)
NM_001108781 (RefSeq)
chimpanzee GMPPB 460378 (Entrez Gene)
Chr3 XP_516466 (RefSeq)
rhesus macaque GMPPB 705454 (Entrez Gene)
Chr2 NP_001252910 (RefSeq)
NM_001265981 (RefSeq)
cattle GMPPB 514161 (Entrez Gene)
Chr22 Q2YDJ9 (UniProt | EBI)
NM_001046168 (RefSeq)
dog GMPPB 100856660 (Entrez Gene)
Chr20 XP_003639816 (RefSeq)
chicken GMPPB 415924 (Entrez Gene)
Chr12 NP_001280244 (RefSeq)
NM_001293315 (RefSeq)
western clawed frog gmppb 493267 (Entrez Gene)
ChrUN Q68EQ1 (UniProt | EBI)
NM_001008434 (RefSeq)
zebrafish gmppb 445097 (Entrez Gene)
Chr22 Q6DBU5 (UniProt | EBI)
NM_001003491 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory