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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
55719

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CDKL5 HGNC:11411 (HGNC)
6792 (Entrez Gene)
300203 (OMIM)
ChrX p22 ChrX:18425605-18653629 (+)
GRCh38
Angelman Syndrome; AS
Epileptic Encephalopathy, Early Infantile, 2; EIEE2
O76039 (UniProt | EBI)
NM_003159 (RefSeq)
mouse Cdkl5 MGI:1278336 (MGI)
382253 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 73.95 cM ChrX:160784308-160994702 (-)
GRCm38
OTTMUSG00000019591 (VEGA)
OTTMUSP00000021165 (VEGA)
OTTMUST00000046802 (VEGA)
rat Cdkl5 100362725 (Entrez Gene)
ChrX XP_006227387 (RefSeq)
chimpanzee CDKL5 473529 (Entrez Gene)
ChrX XP_003317430 (RefSeq)
rhesus macaque LOC693974 693974 (Entrez Gene)
ChrX XP_002808564 (RefSeq)
cattle CDKL5 538337 (Entrez Gene)
ChrX XP_002700425 (RefSeq)
dog CDKL5 491761 (Entrez Gene)
ChrX XP_548881 (RefSeq)
chicken CDKL5 428001 (Entrez Gene)
Chr1 XP_425571 (RefSeq)
zebrafish cdkl5 559341 (Entrez Gene)
Chr11 NP_001124243 (RefSeq)
NM_001130771 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory