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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55648

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LMX1B HGNC:6654 (HGNC)
4010 (Entrez Gene)
602575 (OMIM)
Chr9 q33.3 Chr9:126614443-126701032 (+)
GRCh38
Nail-Patella Syndrome; NPS
O60663 (UniProt | EBI)
NM_002316 (RefSeq)
mouse Lmx1b MGI:1100513 (MGI)
16917 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 22.48 cM Chr2:33560965-33640511 (-)
GRCm38
Nail-Patella Syndrome; NPS
OTTMUSG00000012589 (VEGA)
OTTMUSP00000013489 (VEGA)
OTTMUST00000029994 (VEGA)
rat Lmx1b 114501 (Entrez Gene)
Chr3 p11 XP_006224428 (RefSeq)
chimpanzee LMX1B 739919 (Entrez Gene)
Chr9 XP_009455748 (RefSeq)
cattle LMX1B 100337389 (Entrez Gene)
Chr11 XP_002691651 (RefSeq)
dog LMX1B 403499 (Entrez Gene)
Chr9 XP_003435360 (RefSeq)
NM_001197105 (RefSeq)
chicken LMX1B 396312 (Entrez Gene)
Chr17 P53413 (UniProt | EBI)
NM_205358 (RefSeq)
western clawed frog LOC100495130 100495130 (Entrez Gene)
ChrUN XP_002937918 (RefSeq)
zebrafish lmx1bb 554360 (Entrez Gene)
Chr8 NP_001020338 (RefSeq)
NM_001025167 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory