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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55606

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CMA1 HGNC:2097 (HGNC)
1215 (Entrez Gene)
118938 (OMIM)
Chr14 q11.2 Chr14:24505506-24508265 (-)
GRCh38
P23946 (UniProt | EBI)
NM_001836 (RefSeq)
mouse Cma1 MGI:96941 (MGI)
17228 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 28.19 cM Chr14:55941453-55944661 (-)
GRCm38
ENSMUSG00000022225 (Ensembl Gene Model)
ENSMUSP00000022834 (Ensembl)
ENSMUST00000022834 (Ensembl)
rat Cma1 25627 (Entrez Gene)
Chr15 p13 P50339 (UniProt | EBI)
NM_013092 (RefSeq)
chimpanzee CMA1 745533 (Entrez Gene)
Chr14 XP_001170224 (RefSeq)
rhesus macaque CMA1 716395 (Entrez Gene)
Chr7 NP_001181562 (RefSeq)
NM_001194633 (RefSeq)
cattle LOC540321 540321 (Entrez Gene)
Chr21 XP_593156 (RefSeq)
LOC100139881 100139881 (Entrez Gene)
Chr21 XP_001790127 (RefSeq)
dog CMA1 490628 (Entrez Gene)
Chr8 P21842 (UniProt | EBI)
NM_001013424 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory