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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55559

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ABCC6 HGNC:57 (HGNC)
368 (Entrez Gene)
603234 (OMIM)
Chr16 p13.1 Chr16:16149565-16223471 (-)
GRCh38
Arterial Calcification, Generalized, of Infancy, 2; GACI2
Pseudoxanthoma Elasticum, Forme Fruste
Pseudoxanthoma Elasticum; PXE
O95255 (UniProt | EBI)
NM_001171 (RefSeq)
mouse Abcc6 MGI:1351634 (MGI)
27421 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 29.64 cM Chr7:45976380-46030302 (-)
GRCm38
Pseudoxanthoma Elasticum; PXE
OTTMUSG00000031288 (VEGA)
OTTMUSP00000041023 (VEGA)
OTTMUST00000077529 (VEGA)
rat Abcc6 81642 (Entrez Gene)
Chr1 q22 O88269 (UniProt | EBI)
NM_031013 (RefSeq)
chimpanzee LOC742522 742522 (Entrez Gene)
Chr16 XP_001145741 (RefSeq)
rhesus macaque LOC717875 717875 (Entrez Gene)
Chr20 XP_001109862 (RefSeq)
cattle ABCC6 100337270 (Entrez Gene)
Chr25 NP_001263299 (RefSeq)
NM_001276370 (RefSeq)
dog ABCC6 489993 (Entrez Gene)
Chr6 XP_547113 (RefSeq)
chicken ABCC6 416600 (Entrez Gene)
Chr14 NP_001239009 (RefSeq)
NM_001252080 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/23/2014
MGI 5.20
The Jackson Laboratory