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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC6A3 HGNC:11049 (HGNC)
6531 (Entrez Gene)
126455 (OMIM)
HGNC homology
Chr5 p15.3 Chr5:1392790-1445428 (-)
Parkinsonism-Dystonia, Infantile; PKDYS
Tobacco Addiction, Susceptibility to
Q01959 (UniProt | EBI)
NM_001044 (RefSeq)
mouse Slc6a3 MGI:94862 (MGI)
13162 (Entrez Gene)
Gene Tree
HGNC homology
Chr13 40.1 cM Chr13:73536747-73578672 (+)
Attention Deficit-Hyperactivity Disorder; ADHD
Gilles De La Tourette Syndrome; GTS
Obsessive-Compulsive Disorder; OCD
Schizophrenia; SCZD
ENSMUSG00000021609 (Ensembl Gene Model)
ENSMUSP00000022100 (Ensembl)
ENSMUST00000022100 (Ensembl)
rat Slc6a3 24898 (Entrez Gene)
Chr1 p11 P23977 (UniProt | EBI)
NM_012694 (RefSeq)
chimpanzee SLC6A3 750842 (Entrez Gene)
Chr5 XP_009447041 (RefSeq)
rhesus macaque SLC6A3 574143 (Entrez Gene)
Chr6 NP_001027998 (RefSeq)
NM_001032826 (RefSeq)
dog SLC6A3 609304 (Entrez Gene)
Chr34 NP_001129972 (RefSeq)
NM_001136500 (RefSeq)
western clawed frog slc6a3 100488824 (Entrez Gene)
ChrUN XP_004915389 (RefSeq)
zebrafish slc6a3 80787 (Entrez Gene)
Chr16 NP_571830 (RefSeq)
NM_131755 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.03
The Jackson Laboratory