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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55547

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC6A3 HGNC:11049 (HGNC)
6531 (Entrez Gene)
126455 (OMIM)
Chr5 p15.3 Chr5:1392790-1445428 (-)
GRCh38
Parkinsonism-Dystonia, Infantile; PKDYS
Tobacco Addiction, Susceptibility to
Q01959 (UniProt | EBI)
NM_001044 (RefSeq)
mouse Slc6a3 MGI:94862 (MGI)
13162 (Entrez Gene)
Gene Tree
VISTA-Point
Chr13 40.1 cM Chr13:73536747-73578672 (+)
GRCm38
Attention Deficit-Hyperactivity Disorder; ADHD
Gilles De La Tourette Syndrome; GTS
Obsessive-Compulsive Disorder; OCD
Schizophrenia; SCZD
13162 (NCBI Gene Model)
Q61327 (UniProt | EBI)
NM_010020 (RefSeq)
rat Slc6a3 24898 (Entrez Gene)
Chr1 p11 P23977 (UniProt | EBI)
NM_012694 (RefSeq)
chimpanzee SLC6A3 750842 (Entrez Gene)
Chr5 XP_001175202 (RefSeq)
rhesus macaque SLC6A3 574143 (Entrez Gene)
Chr6 NP_001027998 (RefSeq)
NM_001032826 (RefSeq)
dog SLC6A3 609304 (Entrez Gene)
Chr34 NP_001129972 (RefSeq)
NM_001136500 (RefSeq)
zebrafish slc6a3 80787 (Entrez Gene)
Chr16 NP_571830 (RefSeq)
NM_131755 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory