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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55541

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CCL1 HGNC:10609 (HGNC)
6346 (Entrez Gene)
182281 (OMIM)
HGNC homology
Chr17 q12 Chr17:34360328-34363233 (-)
GRCh38.p7
P22362 (UniProt | EBI)
NM_002981 (RefSeq)
mouse Ccl1 MGI:98258 (MGI)
20290 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 49.99 cM Chr11:82176666-82179812 (-)
GRCm38
20290 (NCBI Gene Model)
P10146 (UniProt | EBI)
NM_011329 (RefSeq)
rat Ccl1 688605 (Entrez Gene)
Chr10 q26 NP_001178021 (RefSeq)
NM_001191092 (RefSeq)
chimpanzee CCL1 748131 (Entrez Gene)
Chr17 XP_003315573 (RefSeq)
cattle CCL1 786156 (Entrez Gene)
Chr19 XP_002695678 (RefSeq)
dog CCL1 448788 (Entrez Gene)
Chr9 NP_001005252 (RefSeq)
NM_001005252 (RefSeq)
macaque, rhesus CCL1 574177 (Entrez Gene)
Chr16 NP_001028021 (RefSeq)
NM_001032849 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory