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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55533

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAB5C HGNC:9785 (HGNC)
5878 (Entrez Gene)
604037 (OMIM)
Chr17 q21.2 Chr17:42124976-42155044 (-)
GRCh38
P51148 (UniProt | EBI)
NM_004583 (RefSeq)
mouse Rab5c MGI:105306 (MGI)
19345 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 63.54 cM Chr11:100715009-100738215 (-)
GRCm38
OTTMUSG00000002056 (VEGA)
OTTMUSP00000001996 (VEGA)
OTTMUST00000004177 (VEGA)
rat Rab5c 287709 (Entrez Gene)
Chr10 q32.1 NP_001099310 (RefSeq)
NM_001105840 (RefSeq)
chimpanzee RAB5C 454678 (Entrez Gene)
Chr17 NP_001233312 (RefSeq)
NM_001246383 (RefSeq)
rhesus macaque RAB5C 709308 (Entrez Gene)
Chr16 NP_001253100 (RefSeq)
NM_001266171 (RefSeq)
cattle RAB5C 613749 (Entrez Gene)
Chr19 Q58DS9 (UniProt | EBI)
NM_001034743 (RefSeq)
chicken RAB5C 395197 (Entrez Gene)
Chr27 Q98932 (UniProt | EBI)
NM_204525 (RefSeq)
western clawed frog rab5c 594914 (Entrez Gene)
ChrUN NP_001025499 (RefSeq)
NM_001030328 (RefSeq)
zebrafish rab5c 386807 (Entrez Gene)
Chr3 NP_958909 (RefSeq)
NM_201501 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory