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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55455

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RPGR HGNC:10295 (HGNC)
6103 (Entrez Gene)
312610 (OMIM)
ChrX p21.1 ChrX:38269170-38327564 (-)
GRCh38
Cone-Rod Dystrophy, X-Linked, 1; CORDX1
Macular Degeneration, X-Linked Atrophic
Retinitis Pigmentosa 3; RP3
Retinitis Pigmentosa, X-Linked, and Sinorespiratory Infections, with or without Deafness
Q92834 (UniProt | EBI)
NM_000328 (RefSeq)
mouse Rpgr MGI:1344037 (MGI)
19893 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 4.62 cM ChrX:10073621-10216920 (-)
GRCm38
Cone-Rod Dystrophy, X-Linked, 1; CORDX1
Retinitis Pigmentosa 3; RP3
OTTMUSG00000016902 (VEGA)
OTTMUSP00000018361 (VEGA)
OTTMUST00000041011 (VEGA)
rat Rpgr 367733 (Entrez Gene)
ChrX q13 XP_003754780 (RefSeq)
NM_001127601 (RefSeq)
chimpanzee RPGR 465570 (Entrez Gene)
ChrX XP_003954016 (RefSeq)
dog RPGR 403726 (Entrez Gene)
ChrX Q9N1T2 (UniProt | EBI)
NM_001003126 (RefSeq)
western clawed frog rpgr 733454 (Entrez Gene)
ChrUN NP_001037872 (RefSeq)
NM_001044407 (RefSeq)
zebrafish rpgrb 557752 (Entrez Gene)
Chr11 XP_685964 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory