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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CNGA1 HGNC:2148 (HGNC)
1259 (Entrez Gene)
123825 (OMIM)
HGNC homology
Chr4 p12 Chr4:47935015-48016718 (-)
retinitis pigmentosa
retinitis pigmentosa 49
P29973 (UniProt | EBI)
NM_001142564 (RefSeq)
mouse Cnga1 MGI:88436 (MGI)
12788 (Entrez Gene)
Gene Tree
HGNC homology
Chr5 38.44 cM Chr5:72603696-72644275 (-)
OTTMUSG00000026745 (VEGA)
OTTMUSP00000072868 (VEGA)
OTTMUST00000138684 (VEGA)
rat Cnga1 85259 (Entrez Gene)
Chr14 p11 Q62927 (UniProt | EBI)
NM_053497 (RefSeq)
chimpanzee CNGA1 739850 (Entrez Gene)
Chr4 XP_016800416 (RefSeq)
cattle CNGA1 281700 (Entrez Gene)
Chr6 Q00194 (UniProt | EBI)
NM_174278 (RefSeq)
dog CNGA1 403891 (Entrez Gene)
Chr13 Q28279 (UniProt | EBI)
NM_001003222 (RefSeq)
chicken CNGA1 396143 (Entrez Gene)
Chr4 Q90980 (UniProt | EBI)
NM_205220 (RefSeq)
zebrafish cnga1b 572249 (Entrez Gene)
Chr23 XP_701036 (RefSeq)
frog, western clawed cnga1 100491997 (Entrez Gene)
Chr1 XP_017950934 (RefSeq)
macaque, rhesus CNGA1 704891 (Entrez Gene)
Chr5 XP_014993822 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory