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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55430

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CDKN2A HGNC:1787 (HGNC)
1029 (Entrez Gene)
600160 (OMIM)
HGNC homology
Chr9 p21 Chr9:21967752-21995043 (-)
GRCh38.p2
Melanoma-Astrocytoma Syndrome
Melanoma, Cutaneous Malignant, Susceptibility to, 2; CMM2
Melanoma-Pancreatic Cancer Syndrome
P42771 (UniProt | EBI)
NM_000077 (RefSeq)
mouse Cdkn2a MGI:104738 (MGI)
12578 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 42.15 cM Chr4:89274471-89294653 (-)
GRCm38
Oculopalatocerebral Syndrome
OTTMUSG00000007706 (VEGA)
OTTMUSP00000008144 (VEGA)
OTTMUST00000017645 (VEGA)
rat Cdkn2a 25163 (Entrez Gene)
Chr5 q32 Q8QZZ9 (UniProt | EBI)
NM_031550 (RefSeq)
chimpanzee CDKN2A 465021 (Entrez Gene)
Chr9 NP_001139762 (RefSeq)
NM_001146290 (RefSeq)
rhesus macaque LOC709988 709988 (Entrez Gene)
Chr15 XP_001098554 (RefSeq)
cattle CDKN2A 616369 (Entrez Gene)
Chr8 XP_010796882 (RefSeq)
dog CDKN2A 100271861 (Entrez Gene)
Chr11 XP_003431646 (RefSeq)
western clawed frog cdkn2b 448767 (Entrez Gene)
ChrUN NP_001006920 (RefSeq)
NM_001006919 (RefSeq)
zebrafish LOC100329528 100329528 (Entrez Gene)
Chr1 XP_002660514 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory