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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5436

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRAPPC2 HGNC:23068 (HGNC)
6399 (Entrez Gene)
300202 (OMIM)
ChrX p22 ChrX:13712242-13734635 (-)
GRCh38
Spondyloepiphyseal Dysplasia Tarda, X-Linked; SEDT
P0DI81 (UniProt | EBI)
NM_001011658 (RefSeq)
mouse Trappc2 MGI:1913476 (MGI)
66226 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 77.43 cM ChrX:166440574-166453140 (+)
GRCm38
OTTMUSG00000019550 (VEGA)
OTTMUSP00000021093 (VEGA)
OTTMUST00000046689 (VEGA)
rat Trappc2 501550 (Entrez Gene)
ChrX q21 NP_001020136 (RefSeq)
NM_001024965 (RefSeq)
chimpanzee TRAPPC2 736265 (Entrez Gene)
ChrX XP_001136084 (RefSeq)
rhesus macaque TRAPPC2 707571 (Entrez Gene)
Chr19 XP_001092331 (RefSeq)
cattle TRAPPC2 616748 (Entrez Gene)
ChrX Q3T0F2 (UniProt | EBI)
NM_001034796 (RefSeq)
dog TRAPPC2 480840 (Entrez Gene)
ChrX XP_537957 (RefSeq)
chicken TRAPPC2 418634 (Entrez Gene)
Chr1 Q5ZKP4 (UniProt | EBI)
NM_001006263 (RefSeq)
western clawed frog trappc2 549396 (Entrez Gene)
ChrUN Q28IG8 (UniProt | EBI)
NM_001016642 (RefSeq)
zebrafish trappc2 767808 (Entrez Gene)
Chr9 Q08CN0 (UniProt | EBI)
NM_001076775 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory