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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5422

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PC HGNC:8636 (HGNC)
5091 (Entrez Gene)
608786 (OMIM)
Chr11 q13.4-q13.5 Chr11:66848522-66958376 (-)
GRCh38
Pyruvate Carboxylase Deficiency
P11498 (UniProt | EBI)
NM_000920 (RefSeq)
mouse Pcx MGI:97520 (MGI)
18563 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 4.07 cM Chr19:4510472-4621752 (+)
GRCm38
18563 (NCBI Gene Model)
Q05920 (UniProt | EBI)
NM_001162946 (RefSeq)
rat Pc 25104 (Entrez Gene)
Chr1 q42 P52873 (UniProt | EBI)
NM_012744 (RefSeq)
chimpanzee PC 451356 (Entrez Gene)
Chr11 XP_003952003 (RefSeq)
rhesus macaque PC 713103 (Entrez Gene)
Chr14 NP_001248513 (RefSeq)
NM_001261584 (RefSeq)
cattle PC 338471 (Entrez Gene)
Chr29 Q29RK2 (UniProt | EBI)
NM_177946 (RefSeq)
dog PC 483704 (Entrez Gene)
Chr18 XP_540825 (RefSeq)
western clawed frog pc.2 100125118 (Entrez Gene)
ChrUN NP_001096495 (RefSeq)
NM_001103025 (RefSeq)
zebrafish pcxb 58068 (Entrez Gene)
Chr7 NP_571625 (RefSeq)
NM_131550 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory