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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ABAT HGNC:23 (HGNC)
18 (Entrez Gene)
137150 (OMIM)
HGNC homology
Chr16 p13.2 Chr16:8674587-8784575 (+)
GABA aminotransferase deficiency
P80404 (UniProt | EBI)
NM_020686 (RefSeq)
mouse Abat MGI:2443582 (MGI)
268860 (Entrez Gene)
Gene Tree
HGNC homology
Chr16 4.06 cM Chr16:8513429-8621568 (+)
OTTMUSG00000025937 (VEGA)
OTTMUSP00000031702 (VEGA)
OTTMUST00000063947 (VEGA)
rat Abat 81632 (Entrez Gene)
Chr10 q12 P50554 (UniProt | EBI)
NM_031003 (RefSeq)
chimpanzee ABAT 453903 (Entrez Gene)
Chr16 XP_016784867 (RefSeq)
cattle ABAT 280969 (Entrez Gene)
Chr25 Q9BGI0 (UniProt | EBI)
NM_001081581 (RefSeq)
dog ABAT 479856 (Entrez Gene)
Chr6 XP_851424 (RefSeq)
chicken ABAT 416642 (Entrez Gene)
Chr14 XP_004945379 (RefSeq)
zebrafish abat 378968 (Entrez Gene)
Chr3 NP_958906 (RefSeq)
NM_201498 (RefSeq)
frog, western clawed abat 100158654 (Entrez Gene)
Chr9 NP_001121529 (RefSeq)
NM_001128057 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory