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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
542

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ABAT HGNC:23 (HGNC)
18 (Entrez Gene)
137150 (OMIM)
Chr16 p13.2 Chr16:8674587-8784575 (+)
GRCh38
Gaba-Transaminase Deficiency
P80404 (UniProt | EBI)
NM_000663 (RefSeq)
mouse Abat MGI:2443582 (MGI)
268860 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 4.06 cM Chr16:8513429-8621568 (+)
GRCm38
OTTMUSG00000025937 (VEGA)
OTTMUSP00000031702 (VEGA)
OTTMUST00000063947 (VEGA)
rat Abat 81632 (Entrez Gene)
Chr10 q12 P50554 (UniProt | EBI)
NM_031003 (RefSeq)
chimpanzee ABAT 453903 (Entrez Gene)
Chr16 XP_001137090 (RefSeq)
dog ABAT 479856 (Entrez Gene)
Chr6 XP_851424 (RefSeq)
chicken ABAT 416642 (Entrez Gene)
Chr14 XP_414940 (RefSeq)
zebrafish abat 378968 (Entrez Gene)
Chr3 NP_958906 (RefSeq)
NM_201498 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory