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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5343

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RFT1 HGNC:30220 (HGNC)
91869 (Entrez Gene)
611908 (OMIM)
Chr3 p21.1 Chr3:53085633-53130464 (-)
GRCh38
Congenital Disorder of Glycosylation, Type In; CDG1N
Q96AA3 (UniProt | EBI)
NM_052859 (RefSeq)
mouse Rft1 MGI:3607791 (MGI)
328370 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 18.9 cM Chr14:30654360-30691317 (+)
GRCm38
OTTMUSG00000025088 (VEGA)
OTTMUSP00000030345 (VEGA)
OTTMUST00000061730 (VEGA)
rat Rft1 290552 (Entrez Gene)
Chr16 p16 NP_001129338 (RefSeq)
NM_001135866 (RefSeq)
chimpanzee RFT1 460441 (Entrez Gene)
Chr3 XP_516524 (RefSeq)
rhesus macaque RFT1 694586 (Entrez Gene)
Chr2 XP_001083828 (RefSeq)
cattle RFT1 504597 (Entrez Gene)
Chr22 NP_001178960 (RefSeq)
NM_001192031 (RefSeq)
dog RFT1 476589 (Entrez Gene)
Chr20 XP_533793 (RefSeq)
chicken RFT1 770487 (Entrez Gene)
Chr12 NP_001136344 (RefSeq)
NM_001142872 (RefSeq)
western clawed frog rft1 780289 (Entrez Gene)
ChrUN Q0D2E8 (UniProt | EBI)
NM_001079360 (RefSeq)
zebrafish rft1 559873 (Entrez Gene)
Chr6 XP_688354 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory