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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
530

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SOD2 HGNC:11180 (HGNC)
6648 (Entrez Gene)
147460 (OMIM)
Chr6 q25.3 Chr6:159679116-159693321 (-)
GRCh38
Microvascular Complications of Diabetes, Susceptibility to, 6; MVCD6
P04179 (UniProt | EBI)
NM_000636 (RefSeq)
mouse Sod2 MGI:98352 (MGI)
20656 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 8.75 cM Chr17:13007839-13018119 (+)
GRCm38
Amyotrophic Lateral Sclerosis 1; ALS1
Canavan Disease
Leigh Syndrome; LS
20656 (NCBI Gene Model)
P09671 (UniProt | EBI)
NM_013671 (RefSeq)
rat Sod2 24787 (Entrez Gene)
Chr1 q21 P07895 (UniProt | EBI)
NM_017051 (RefSeq)
chimpanzee SOD2 449634 (Entrez Gene)
Chr6 Q8HXP7 (UniProt | EBI)
NM_001009022 (RefSeq)
rhesus macaque SOD2 574097 (Entrez Gene)
Chr4 Q8HXP2 (UniProt | EBI)
NM_001032805 (RefSeq)
dog SOD2 476258 (Entrez Gene)
Chr1 XP_533463 (RefSeq)
XM_533463 (RefSeq)
chicken SOD2 374042 (Entrez Gene)
Chr3 NP_989542 (RefSeq)
NM_204211 (RefSeq)
western clawed frog sod2 448200 (Entrez Gene)
ChrUN NP_001005694 (RefSeq)
NM_001005694 (RefSeq)
zebrafish sod2 335799 (Entrez Gene)
Chr20 NP_956270 (RefSeq)
NM_199976 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory