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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5297

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human POMT2 HGNC:19743 (HGNC)
29954 (Entrez Gene)
607439 (OMIM)
Chr14 q24 Chr14:77274956-77320882 (-)
GRCh38
Muscular Dystrophy-Dystroglycanopathy (congenital with Brain and Eye Anomalies), Type A, 1; MDDGA1
Muscular Dystrophy-Dystroglycanopathy (congenital with Brain and Eye Anomalies), Type A, 2; MDDGA2
Muscular Dystrophy-Dystroglycanopathy (congenital with Mental Retardation), Type B, 2; MDDGB2
Muscular Dystrophy-Dystroglycanopathy (limb-Girdle), Type C, 2; MDDGC2
Q9UKY4 (UniProt | EBI)
NM_013382 (RefSeq)
mouse Pomt2 MGI:2444430 (MGI)
217734 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 41.3 cM Chr12:87106866-87147902 (-)
GRCm38
217734 (NCBI Gene Model)
Q8BGQ4 (UniProt | EBI)
NM_153415 (RefSeq)
rat Pomt2 688673 (Entrez Gene)
Chr6 q31 NP_001040579 (RefSeq)
NM_001047114 (RefSeq)
chimpanzee POMT2 453067 (Entrez Gene)
Chr14 XP_510091 (RefSeq)
rhesus macaque POMT2 705604 (Entrez Gene)
Chr7 NP_001247555 (RefSeq)
NM_001260626 (RefSeq)
cattle POMT2 537054 (Entrez Gene)
Chr10 NP_001179825 (RefSeq)
NM_001192896 (RefSeq)
dog POMT2 480400 (Entrez Gene)
Chr8 XP_537521 (RefSeq)
chicken POMT2 423373 (Entrez Gene)
Chr5 XP_004941879 (RefSeq)
western clawed frog pomt2 100490100 (Entrez Gene)
ChrUN XP_002938909 (RefSeq)
zebrafish pomt2 563878 (Entrez Gene)
Chr17 NP_001038498 (RefSeq)
NM_001045033 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory