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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
52819

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC6A19 HGNC:27960 (HGNC)
340024 (Entrez Gene)
608893 (OMIM)
Chr5 p15.33 Chr5:1201595-1225117 (+)
GRCh38
Hartnup Disorder
Hyperglycinuria
Iminoglycinuria
Q695T7 (UniProt | EBI)
NM_001003841 (RefSeq)
mouse Slc6a19 MGI:1921588 (MGI)
74338 (Entrez Gene)
Gene Tree
VISTA-Point
Chr13 40.14 cM Chr13:73679745-73704865 (-)
GRCm38
Hartnup Disorder
OTTMUSG00000026285 (VEGA)
OTTMUSP00000032347 (VEGA)
OTTMUST00000065018 (VEGA)
rat Slc6a19 664630 (Entrez Gene)
Chr1 p11 Q2A865 (UniProt | EBI)
NM_001039722 (RefSeq)
rhesus macaque SLC6A19 100424683 (Entrez Gene)
Chr6 XP_002804345 (RefSeq)
cattle SLC6A19 100337416 (Entrez Gene)
Chr20 XP_002696512 (RefSeq)
dog SLC6A19 100683912 (Entrez Gene)
Chr34 XP_003434149 (RefSeq)
chicken SLC6A19 420971 (Entrez Gene)
Chr2 XP_419056 (RefSeq)
zebrafish LOC100334171 100334171 (Entrez Gene)
Chr19 XP_002665492 (RefSeq)
slc6a19a 553256 (Entrez Gene)
Chr19 NP_001091648 (RefSeq)
NM_001098178 (RefSeq)
slc6a19b 326030 (Entrez Gene)
Chr16 NP_956030 (RefSeq)
NM_199736 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory