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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
526

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ITGAM HGNC:6149 (HGNC)
3684 (Entrez Gene)
120980 (OMIM)
Chr16 p11.2 Chr16:31259967-31332892 (+)
GRCh38
Systemic Lupus Erythematosus, Susceptibility to, 6; SLEB6
P11215 (UniProt | EBI)
NM_000632 (RefSeq)
mouse Itgam MGI:96607 (MGI)
16409 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 69.93 cM Chr7:128062640-128128160 (+)
GRCm38
OTTMUSG00000030928 (VEGA)
OTTMUSP00000040303 (VEGA)
OTTMUST00000076530 (VEGA)
rat Itgam 25021 (Entrez Gene)
Chr1 q36 NP_036843 (RefSeq)
NM_012711 (RefSeq)
chimpanzee ITGAM 454069 (Entrez Gene)
Chr16 NP_001181863 (RefSeq)
NM_001194934 (RefSeq)
cattle ITGAM 407124 (Entrez Gene)
Chr25 NP_001035046 (RefSeq)
NM_001039957 (RefSeq)
dog ITGAM 489928 (Entrez Gene)
Chr6 XP_848527 (RefSeq)
zebrafish LOC563715 563715 (Entrez Gene)
Chr12 XP_692164 (RefSeq)
LOC101882585 101882585 (Entrez Gene)
Chr12 XP_005156064 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory