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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5254

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COPE HGNC:2234 (HGNC)
11316 (Entrez Gene)
606942 (OMIM)
COPE (gene) (MyGene.info)
HGNC homology
Chr19 p13.11 Chr19:18899514-18919464 (-)
GRCh38.p7
O14579 (UniProt | EBI)
NM_007263 (RefSeq)
mouse Cope MGI:1891702 (MGI)
59042 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr8 34.15 cM Chr8:70302785-70312990 (+)
GRCm38
59042 (NCBI Gene Model)
O89079 (UniProt | EBI)
NM_021538 (RefSeq)
rat Cope 290659 (Entrez Gene)
Chr16 p14 NP_001099546 (RefSeq)
NM_001106076 (RefSeq)
chimpanzee COPE 455865 (Entrez Gene)
Chr19 XP_001137095 (RefSeq)
cattle COPE 338085 (Entrez Gene)
Chr7 Q28104 (UniProt | EBI)
NM_176673 (RefSeq)
dog COPE 476663 (Entrez Gene)
Chr20 XP_852205 (RefSeq)
chicken COPE 420117 (Entrez Gene)
Chr28 Q5ZIK9 (UniProt | EBI)
NM_001006339 (RefSeq)
zebrafish cope 492492 (Entrez Gene)
Chr2 NP_001007365 (RefSeq)
NM_001007364 (RefSeq)
frog, western clawed cope 100127627 (Entrez Gene)
Chr1 NP_001106450 (RefSeq)
NM_001112979 (RefSeq)
macaque, rhesus COPE 719631 (Entrez Gene)
Chr19 NP_001181589 (RefSeq)
NM_001194660 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory