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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5250

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VPS45 HGNC:14579 (HGNC)
11311 (Entrez Gene)
610035 (OMIM)
VPS45 (MyGene.info)
HGNC homology
Chr1 q21.2 Chr1:150067293-150145327 (+)
GRCh38.p7
Q9NRW7 (UniProt | EBI)
NM_001279353 (RefSeq)
mouse Vps45 MGI:891965 (MGI)
22365 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 41.65 cM Chr3:95999832-96058455 (-)
GRCm38
22365 (NCBI Gene Model)
P97390 (UniProt | EBI)
NM_013841 (RefSeq)
rat Vps45 64516 (Entrez Gene)
Chr2 q34 O08700 (UniProt | EBI)
NM_172072 (RefSeq)
chimpanzee VPS45 457267 (Entrez Gene)
Chr1 XP_024203965 (RefSeq)
cattle VPS45 541230 (Entrez Gene)
Chr3 NP_001076970 (RefSeq)
NM_001083501 (RefSeq)
dog VPS45 475833 (Entrez Gene)
Chr17 XP_533042 (RefSeq)
zebrafish vps45 561653 (Entrez Gene)
Chr19 NP_001243585 (RefSeq)
NM_001256656 (RefSeq)
frog, western clawed vps45 779959 (Entrez Gene)
Chr8 NP_001072504 (RefSeq)
NM_001079036 (RefSeq)
macaque, rhesus VPS45 706035 (Entrez Gene)
Chr1 XP_002801802 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
07/09/2019
MGI 6.14
The Jackson Laboratory