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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
52382

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SOGA1 HGNC:16111 (HGNC)
140710 (Entrez Gene)
C20orf117 (MyGene.info)
HGNC homology
Chr20 q11.23 Chr20:36777442-36863684 (-)
GRCh38.p7
O94964 (UniProt | EBI)
NM_152257 (RefSeq)
mouse Soga1 MGI:2444575 (MGI)
320706 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 77.91 cM Chr2:157015799-157079254 (-)
GRCm38
ENSMUSG00000055485 (Ensembl Gene Model)
ENSMUSP00000066556 (Ensembl)
ENSMUST00000069098 (Ensembl)
rat Soga1 311578 (Entrez Gene)
Chr3 q42 XP_017447755 (RefSeq)
chimpanzee SOGA1 458222 (Entrez Gene)
Chr20 XP_009435449 (RefSeq)
cattle SOGA1 508997 (Entrez Gene)
Chr13 XP_005215074 (RefSeq)
dog SOGA1 485860 (Entrez Gene)
Chr24 XP_005635076 (RefSeq)
chicken SOGA1 419159 (Entrez Gene)
Chr20 XP_015152276 (RefSeq)
zebrafish soga1 797906 (Entrez Gene)
Chr23 XP_021325573 (RefSeq)
frog, western clawed soga1 100493417 (Entrez Gene)
Chr10 XP_004918552 (RefSeq)
macaque, rhesus SOGA1 702131 (Entrez Gene)
Chr10 XP_015004537 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/12/2019
MGI 6.13
The Jackson Laboratory