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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
52156

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TPRN HGNC:26894 (HGNC)
286262 (Entrez Gene)
613354 (OMIM)
Chr9 q34.3 Chr9:137191617-137200711 (-)
GRCh38
Deafness, Autosomal Recessive 79; DFNB79
Q4KMQ1 (UniProt | EBI)
NM_001128228 (RefSeq)
mouse Tprn MGI:2139535 (MGI)
97031 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 17.11 cM Chr2:25262618-25269885 (+)
GRCm38
OTTMUSG00000011904 (VEGA)
OTTMUSP00000012725 (VEGA)
OTTMUST00000028085 (VEGA)
rat Tprn 499749 (Entrez Gene)
Chr3 p13 Q5XHX2 (UniProt | EBI)
NM_001024309 (RefSeq)
rhesus macaque LOC721581 721581 (Entrez Gene)
Chr15 XP_001117763 (RefSeq)
cattle TPRN 100125320 (Entrez Gene)
Chr11 NP_001096820 (RefSeq)
NM_001103350 (RefSeq)
chicken TPRN 417259 (Entrez Gene)
Chr17 XP_415534 (RefSeq)
western clawed frog LOC101731408 101731408 (Entrez Gene)
ChrUN XP_004917615 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory