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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
51887

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GAPT HGNC:26588 (HGNC)
202309 (Entrez Gene)
HGNC homology
Chr5 q11.2 Chr5:58491435-58496358 (+)
GRCh38.p7
Q8N292 (UniProt | EBI)
NM_001304431 (RefSeq)
mouse Gapt MGI:3608341 (MGI)
238875 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 61.87 cM Chr13:110352616-110357199 (-)
GRCm38
ENSMUSG00000046006 (Ensembl Gene Model)
ENSMUSP00000053775 (Ensembl)
ENSMUST00000058806 (Ensembl)
rat Gapt 686075 (Entrez Gene)
Chr2 q14 NP_001102961 (RefSeq)
NM_001109491 (RefSeq)
chimpanzee GAPT 736847 (Entrez Gene)
Chr5 XP_003310770 (RefSeq)
cattle GAPT 784765 (Entrez Gene)
Chr20 NP_001092867 (RefSeq)
NM_001099397 (RefSeq)
dog GAPT 100683936 (Entrez Gene)
Chr2 XP_005617469 (RefSeq)
macaque, rhesus GAPT 708948 (Entrez Gene)
Chr6 NP_001181160 (RefSeq)
NM_001194231 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/07/2019
MGI 6.14
The Jackson Laboratory