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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
51460

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human POC1A HGNC:24488 (HGNC)
25886 (Entrez Gene)
614783 (OMIM)
Chr3 p21.2 Chr3:52075233-52154704 (-)
GRCh38
Short Stature, Onychodysplasia, Facial Dysmorphism, and Hypotrichosis;
Q8NBT0 (UniProt | EBI)
NM_015426 (RefSeq)
mouse Poc1a MGI:1917485 (MGI)
70235 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 57.46 cM Chr9:106281061-106350521 (+)
GRCm38
OTTMUSG00000049423 (VEGA)
OTTMUSP00000068183 (VEGA)
OTTMUST00000125993 (VEGA)
rat Poc1a 501048 (Entrez Gene)
Chr8 q32 NP_001102766 (RefSeq)
NM_001109296 (RefSeq)
chimpanzee POC1A 460415 (Entrez Gene)
Chr3 XP_516500 (RefSeq)
rhesus macaque POC1A 698157 (Entrez Gene)
Chr2 XP_001086686 (RefSeq)
cattle POC1A 534489 (Entrez Gene)
Chr22 Q2TBP4 (UniProt | EBI)
NM_001038560 (RefSeq)
dog POC1A 484741 (Entrez Gene)
Chr20 XP_541857 (RefSeq)
chicken POC1A 415889 (Entrez Gene)
Chr12 XP_414244 (RefSeq)
western clawed frog poc1a 549362 (Entrez Gene)
ChrUN Q28I85 (UniProt | EBI)
NM_001016608 (RefSeq)
zebrafish poc1a 406322 (Entrez Gene)
Chr11 Q7ZVF0 (UniProt | EBI)
NM_213049 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory