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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5066

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human UPK3A HGNC:12580 (HGNC)
7380 (Entrez Gene)
611559 (OMIM)
Chr22 q13.31 Chr22:45284987-45295874 (+)
GRCh38
O75631 (UniProt | EBI)
NM_006953 (RefSeq)
mouse Upk3a MGI:98914 (MGI)
22270 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 40.25 cM Chr15:85017141-85022560 (+)
GRCm38
Vesicoureteral Reflux 1; VUR1
22270 (NCBI Gene Model)
Q9JKX8 (UniProt | EBI)
NM_023478 (RefSeq)
rat Upk3a 315190 (Entrez Gene)
Chr7 q34 NP_001123979 (RefSeq)
NM_001130507 (RefSeq)
chimpanzee UPK3A 458905 (Entrez Gene)
Chr22 XP_001135467 (RefSeq)
cattle UPK3A 100336102 (Entrez Gene)
Chr5 P38574 (UniProt | EBI)
NM_174709 (RefSeq)
dog UPK3A 609118 (Entrez Gene)
Chr10 XP_851414 (RefSeq)
chicken UPK3A 418242 (Entrez Gene)
Chr1 XP_416466 (RefSeq)
western clawed frog upk3a 394575 (Entrez Gene)
ChrUN NP_988978 (RefSeq)
NM_203647 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory