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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5050

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC6A9 HGNC:11056 (HGNC)
6536 (Entrez Gene)
601019 (OMIM)
Chr1 p33 Chr1:43996483-44031492 (-)
GRCh38
P48067 (UniProt | EBI)
NM_001024845 (RefSeq)
mouse Slc6a9 MGI:95760 (MGI)
14664 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 53.62 cM Chr4:117834506-117875198 (+)
GRCm38
Glycine Encephalopathy; GCE
OTTMUSG00000008656 (VEGA)
OTTMUSP00000049290 (VEGA)
OTTMUST00000090034 (VEGA)
rat Slc6a9 116509 (Entrez Gene)
Chr5 q36 P28572 (UniProt | EBI)
NM_053818 (RefSeq)
chimpanzee SLC6A9 456520 (Entrez Gene)
Chr1 XP_009454115 (RefSeq)
rhesus macaque SLC6A9 702346 (Entrez Gene)
Chr1 XP_001097484 (RefSeq)
cattle SLC6A9 282368 (Entrez Gene)
Chr3 Q28039 (UniProt | EBI)
NM_174612 (RefSeq)
dog SLC6A9 482526 (Entrez Gene)
Chr15 XP_862538 (RefSeq)
chicken SLC6A9 424576 (Entrez Gene)
Chr8 NP_001026450 (RefSeq)
NM_001031279 (RefSeq)
western clawed frog slc6a9 100492204 (Entrez Gene)
ChrUN XP_002931517 (RefSeq)
zebrafish slc6a9 494490 (Entrez Gene)
Chr2 NP_001025244 (RefSeq)
NM_001030073 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory