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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5044

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SC5D HGNC:10547 (HGNC)
6309 (Entrez Gene)
602286 (OMIM)
Chr11 q23.3 Chr11:121292679-121313410 (+)
GRCh38
Lathosterolosis
O75845 (UniProt | EBI)
NM_001024956 (RefSeq)
mouse Sc5d MGI:1353611 (MGI)
235293 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 23.57 cM Chr9:42254177-42264300 (-)
GRCm38
Lathosterolosis
235293 (NCBI Gene Model)
O88822 (UniProt | EBI)
NM_172769 (RefSeq)
rat Sc5d 114100 (Entrez Gene)
Chr8 q22 NP_446094 (RefSeq)
NM_053642 (RefSeq)
chimpanzee SC5DL 451624 (Entrez Gene)
Chr11 XP_001167285 (RefSeq)
rhesus macaque SC5DL 706827 (Entrez Gene)
Chr14 NP_001244446 (RefSeq)
NM_001257517 (RefSeq)
dog SC5D 610411 (Entrez Gene)
Chr5 XP_853004 (RefSeq)
chicken SC5DL 100857756 (Entrez Gene)
Chr24 XP_003642637 (RefSeq)
zebrafish sc5d 447891 (Entrez Gene)
Chr21 NP_001004630 (RefSeq)
NM_001004630 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory