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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
50007

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CFC1 HGNC:18292 (HGNC)
55997 (Entrez Gene)
605194 (OMIM)
HGNC homology
Chr2 q21.1 Chr2:130592165-130599575 (-)
GRCh38.p2
Conotruncal Heart Malformations; CTHM
Heterotaxy, Visceral, 2, Autosomal; HTX2
Transposition of the Great Arteries, Dextro-Looped 2; DTGA2
P0CG37 (UniProt | EBI)
NM_032545 (RefSeq)
CFC1B HGNC:33983 (HGNC)
653275 (Entrez Gene)
HGNC homology
Chr2 q21.1 Chr2:130521094-130527992 (+)
GRCh38.p2
P0CG36 (UniProt | EBI)
NM_001079530 (RefSeq)
mouse Cfc1 MGI:109448 (MGI)
12627 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr1 13.34 cM Chr1:34535648-34544313 (+)
GRCm38
Conotruncal Heart Malformations; CTHM
Right Atrial Isomerism; RAI
Transposition of the Great Arteries, Dextro-Looped 1; DTGA1
OTTMUSG00000049475 (VEGA)
OTTMUSP00000068257 (VEGA)
OTTMUST00000126125 (VEGA)
rat Cfc1 501121 (Entrez Gene)
Chr9 q21 NP_001102774 (RefSeq)
NM_001109304 (RefSeq)
chimpanzee LOC459608 459608 (Entrez Gene)
Chr2B XP_001144170 (RefSeq)
dog LOC609557 609557 (Entrez Gene)
Chr19 XP_005631905 (RefSeq)
chicken CFC1B 395437 (Entrez Gene)
ChrZ Q9I8Q3 (UniProt | EBI)
NM_204700 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory