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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
49729

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KNOP1 HGNC:34404 (HGNC)
400506 (Entrez Gene)
HGNC homology
Chr16 p12.3 Chr16:19706347-19718240 (-)
GRCh38.p7
Q1ED39 (UniProt | EBI)
NM_001348532 (RefSeq)
mouse Knop1 MGI:1913606 (MGI)
66356 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 63.66 cM Chr7:118842222-118856254 (-)
GRCm38
OTTMUSG00000025702 (VEGA)
OTTMUSP00000031279 (VEGA)
OTTMUST00000063297 (VEGA)
rat LOC680982 680982 (Entrez Gene)
Chr2 q21
chimpanzee KNOP1 741477 (Entrez Gene)
Chr16 XP_016785075 (RefSeq)
cattle KNOP1 511442 (Entrez Gene)
Chr25 A5D7J3 (UniProt | EBI)
NM_001166606 (RefSeq)
dog KNOP1 609090 (Entrez Gene)
Chr6 XP_005621543 (RefSeq)
macaque, rhesus KNOP1 695144 (Entrez Gene)
Chr20 XP_001083772 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/13/2018
MGI 6.11
The Jackson Laboratory