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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
497

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LTA HGNC:6709 (HGNC)
4049 (Entrez Gene)
153440 (OMIM)
Chr6 p21.3 Chr6:31572099-31574324 (+)
GRCh38
Leprosy, Susceptibility to, 4; LPRS4
Myocardial Infarction, Susceptibility to
Psoriatic Arthritis, Susceptibility to Psoriatic Arthritis, Susceptibility to, 1; PSORAS1
P01374 (UniProt | EBI)
NM_000595 (RefSeq)
mouse Lta MGI:104797 (MGI)
16992 (Entrez Gene)
Gene Tree
VISTA-Point
Chr17 18.59 cM Chr17:35203165-35205351 (-)
GRCm38
OTTMUSG00000037197 (VEGA)
OTTMUSP00000053531 (VEGA)
OTTMUST00000095890 (VEGA)
rat Lta 25008 (Entrez Gene)
Chr20 p12 Q06332 (UniProt | EBI)
NM_080769 (RefSeq)
chimpanzee LTA 494185 (Entrez Gene)
Chr6 P61125 (UniProt | EBI)
NM_001045510 (RefSeq)
rhesus macaque LTA 715425 (Entrez Gene)
Chr4 Q5TM20 (UniProt | EBI)
NM_001047148 (RefSeq)
cattle LTA 280845 (Entrez Gene)
Chr23 q22 Q06600 (UniProt | EBI)
NM_001013401 (RefSeq)
dog LTA 607183 (Entrez Gene)
Chr12 Q5WR07 (UniProt | EBI)
western clawed frog lta 100135001 (Entrez Gene)
ChrUN NP_001107150 (RefSeq)
NM_001113678 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory