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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LTA HGNC:6709 (HGNC)
4049 (Entrez Gene)
153440 (OMIM)
Lymphotoxin alpha (MyGene.info)
HGNC homology
Chr6 p21.33 Chr6:31560550-31574324 (+)
myocardial infarction
psoriatic arthritis
P01374 (UniProt | EBI)
NM_001159740 (RefSeq)
mouse Lta MGI:104797 (MGI)
16992 (Entrez Gene)
Gene Tree
HGNC homology
Chr17 18.59 cM Chr17:35203165-35205351 (-)
OTTMUSG00000037197 (VEGA)
OTTMUSP00000053531 (VEGA)
OTTMUST00000095890 (VEGA)
rat Lta 25008 (Entrez Gene)
Chr20 p12 Q06332 (UniProt | EBI)
NM_080769 (RefSeq)
chimpanzee LTA 494185 (Entrez Gene)
Chr6 P61125 (UniProt | EBI)
NM_001045510 (RefSeq)
cattle LTA 280845 (Entrez Gene)
Chr23 q22 Q06600 (UniProt | EBI)
NM_001013401 (RefSeq)
dog LTA 607183 (Entrez Gene)
Chr12 Q5WR07 (UniProt | EBI)
NM_001313849 (RefSeq)
frog, western clawed lta 100135001 (Entrez Gene)
Chr8 NP_001107150 (RefSeq)
NM_001113678 (RefSeq)
macaque, rhesus LTA 715425 (Entrez Gene)
Chr4 Q5TM20 (UniProt | EBI)
NM_001047148 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory