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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
49694

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CXCL16 HGNC:16642 (HGNC)
58191 (Entrez Gene)
605398 (OMIM)
HGNC homology
Chr17 p13.2 Chr17:4733529-4739928 (-)
GRCh38.p7
Q9H2A7 (UniProt | EBI)
NM_001100812 (RefSeq)
mouse Cxcl16 MGI:1932682 (MGI)
66102 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 42.99 cM Chr11:70454232-70459984 (-)
GRCm38
66102 (NCBI Gene Model)
Q8BSU2 (UniProt | EBI)
NR_151497 (RefSeq)
rat Cxcl16 497942 (Entrez Gene)
Chr10 q24 Q6AXU5 (UniProt | EBI)
NM_001017478 (RefSeq)
chimpanzee CXCL16 454451 (Entrez Gene)
Chr17 XP_511288 (RefSeq)
cattle CXCL16 511671 (Entrez Gene)
Chr19 Q29RT9 (UniProt | EBI)
NM_001046095 (RefSeq)
dog CXCL16 607514 (Entrez Gene)
Chr5 XP_013968701 (RefSeq)
macaque, rhesus CXCL16 721566 (Entrez Gene)
Chr16 XP_001117747 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory