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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ALMS1 HGNC:428 (HGNC)
7840 (Entrez Gene)
606844 (OMIM)
HGNC homology
Chr2 p13.1 Chr2:73385758-73609919 (+)
Alstrom syndrome
Q8TCU4 (UniProt | EBI)
NM_015120 (RefSeq)
mouse Alms1 MGI:1934606 (MGI)
236266 (Entrez Gene)
Gene Tree
HGNC homology
Chr6 37.48 cM Chr6:85587531-85702753 (+)
Alstrom syndrome
OTTMUSG00000024144 (VEGA)
OTTMUSP00000078543 (VEGA)
OTTMUST00000151456 (VEGA)
rat Alms1 297408 (Entrez Gene)
Chr4 q34 NP_001100074 (RefSeq)
NM_001106604 (RefSeq)
chimpanzee ALMS1 459324 (Entrez Gene)
Chr2A XP_016804283 (RefSeq)
cattle ALMS1 533055 (Entrez Gene)
Chr11 XP_010808157 (RefSeq)
dog ALMS1 475795 (Entrez Gene)
Chr17 XP_022260533 (RefSeq)
macaque, rhesus ALMS1 706612 (Entrez Gene)
Chr13 XP_014968142 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory