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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
49405

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PHF8 HGNC:20672 (HGNC)
23133 (Entrez Gene)
300560 (OMIM)
ChrX p11.22 ChrX:53936680-54048935 (-)
GRCh38
Siderius X-Linked Mental Retardation Syndrome; MRXSSD
Q9UPP1 (UniProt | EBI)
NM_015107 (RefSeq)
mouse Phf8 MGI:2444341 (MGI)
320595 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 68.46 cM ChrX:151520672-151633859 (+)
GRCm38
OTTMUSG00000017224 (VEGA)
OTTMUSP00000018732 (VEGA)
OTTMUST00000041702 (VEGA)
rat Phf8 317425 (Entrez Gene)
ChrX q21 NP_001101723 (RefSeq)
NM_001108253 (RefSeq)
chimpanzee PHF8 465652 (Entrez Gene)
ChrX XP_009437402 (RefSeq)
rhesus macaque PHF8 703633 (Entrez Gene)
ChrX XP_002808578 (RefSeq)
cattle PHF8 513959 (Entrez Gene)
ChrX XP_877543 (RefSeq)
dog PHF8 491897 (Entrez Gene)
ChrX XP_005641442 (RefSeq)
western clawed frog phf8 733740 (Entrez Gene)
ChrUN XP_002939639 (RefSeq)
zebrafish phf8 566534 (Entrez Gene)
Chr23 P0CH95 (UniProt | EBI)
NM_001202447 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory