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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
49348

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SYN2 HGNC:11495 (HGNC)
6854 (Entrez Gene)
600755 (OMIM)
Chr3 p25 Chr3:12004366-12192032 (+)
GRCh38
Schizophrenia; SCZD
Q92777 (UniProt | EBI)
NM_003178 (RefSeq)
mouse Syn2 MGI:103020 (MGI)
20965 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 53.2 cM Chr6:115134902-115282626 (+)
GRCm38
Autism
20965 (NCBI Gene Model)
Q64332 (UniProt | EBI)
NM_013681 (RefSeq)
rat Syn2 29179 (Entrez Gene)
Chr4 q42 Q63537 (UniProt | EBI)
NM_019159 (RefSeq)
chimpanzee SYN2 749839 (Entrez Gene)
Chr3 XP_001171832 (RefSeq)
rhesus macaque LOC695412 695412 (Entrez Gene)
Chr2 XP_001086745 (RefSeq)
cattle SYN2 782758 (Entrez Gene)
Chr22 XP_001789269 (RefSeq)
dog SYN2 484652 (Entrez Gene)
Chr20 XP_541766 (RefSeq)
chicken SYN2 415963 (Entrez Gene)
Chr12 XP_003642037 (RefSeq)
zebrafish syn2a 436870 (Entrez Gene)
Chr23 NP_001002597 (RefSeq)
NM_001002597 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory