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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4927

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LMO4 HGNC:6644 (HGNC)
8543 (Entrez Gene)
603129 (OMIM)
Chr1 p22.3 Chr1:87328468-87348923 (+)
GRCh38
P61968 (UniProt | EBI)
NM_006769 (RefSeq)
mouse Lmo4 MGI:109360 (MGI)
16911 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 68.61 cM Chr3:144188530-144205220 (-)
GRCm38
Anencephaly
OTTMUSG00000029080 (VEGA)
OTTMUSP00000037059 (VEGA)
OTTMUST00000072133 (VEGA)
rat Lmo4 362051 (Entrez Gene)
Chr2 q44 NP_001009708 (RefSeq)
NM_001009708 (RefSeq)
chimpanzee LMO4 737619 (Entrez Gene)
Chr1 XP_001144677 (RefSeq)
rhesus macaque LMO4 712752 (Entrez Gene)
Chr1 NP_001244770 (RefSeq)
NM_001257841 (RefSeq)
cattle LMO4 614212 (Entrez Gene)
Chr3 Q3SWZ8 (UniProt | EBI)
NM_001034751 (RefSeq)
dog LMO4 479962 (Entrez Gene)
Chr6 XP_537086 (RefSeq)
chicken LMO4 373901 (Entrez Gene)
Chr8 NP_989443 (RefSeq)
NM_204112 (RefSeq)
western clawed frog lmo4.1 448304 (Entrez Gene)
ChrUN Q6DJ06 (UniProt | EBI)
NM_001004922 (RefSeq)
zebrafish lmo4b 324849 (Entrez Gene)
Chr6 NP_997854 (RefSeq)
NM_212689 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory