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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
49241

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HMX1 HGNC:5017 (HGNC)
3166 (Entrez Gene)
142992 (OMIM)
Chr4 p16.1 Chr4:8846077-8871817 (-)
GRCh38
Oculoauricular Syndrome
Q9NP08 (UniProt | EBI)
NM_018942 (RefSeq)
mouse Hmx1 MGI:107178 (MGI)
15371 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 18.14 cM Chr5:35389108-35399730 (+)
GRCm38
Oculoauricular Syndrome
OTTMUSG00000037283 (VEGA)
OTTMUSP00000053711 (VEGA)
OTTMUST00000096187 (VEGA)
rat Hmx1 360960 (Entrez Gene)
Chr14 q21 NP_001101833 (RefSeq)
NM_001108363 (RefSeq)
rhesus macaque HMX1 699446 (Entrez Gene)
Chr1 NP_001165900 (RefSeq)
NM_001172429 (RefSeq)
cattle HMX1 785113 (Entrez Gene)
Chr6 XP_003582402 (RefSeq)
dog HMX1 610441 (Entrez Gene)
Chr3 XP_005618551 (RefSeq)
zebrafish LOC100333298 100333298 (Entrez Gene)
Chr12
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory