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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
49239

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FOXD3 HGNC:3804 (HGNC)
27022 (Entrez Gene)
611539 (OMIM)
Chr1 p31.3 Chr1:63323059-63325126 (+)
GRCh38
Autoimmune Disease, Susceptibility to, 1; AIS1
Q9UJU5 (UniProt | EBI)
NM_012183 (RefSeq)
mouse Foxd3 MGI:1347473 (MGI)
15221 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 45.71 cM Chr4:99656299-99658622 (+)
GRCm38
OTTMUSG00000007976 (VEGA)
OTTMUSP00000008307 (VEGA)
OTTMUST00000018082 (VEGA)
rat Foxd3 29203 (Entrez Gene)
Chr5 q33 Q63245 (UniProt | EBI)
chimpanzee FOXD3 456905 (Entrez Gene)
Chr1 XP_513453 (RefSeq)
rhesus macaque FOXD3 696085 (Entrez Gene)
Chr1 NP_001185662 (RefSeq)
NM_001198733 (RefSeq)
cattle FOXD3 532383 (Entrez Gene)
Chr3 XP_005197935 (RefSeq)
dog FOXD3 489558 (Entrez Gene)
Chr5 XP_003434654 (RefSeq)
western clawed frog foxd3 496851 (Entrez Gene)
ChrUN Q5M7L9 (UniProt | EBI)
NM_001011383 (RefSeq)
zebrafish foxd3 30548 (Entrez Gene)
Chr6 NP_571365 (RefSeq)
NM_131290 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory