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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4901

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXA2 HGNC:5103 (HGNC)
3199 (Entrez Gene)
604685 (OMIM)
Chr7 p15.2 Chr7:27100354-27102775 (-)
GRCh38
Microtia, Hearing Impairment, and Cleft Palate
O43364 (UniProt | EBI)
NM_006735 (RefSeq)
mouse Hoxa2 MGI:96174 (MGI)
15399 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 25.4 cM Chr6:52162511-52164831 (-)
GRCm38
OTTMUSG00000037358 (VEGA)
OTTMUSP00000020418 (VEGA)
OTTMUST00000045381 (VEGA)
rat Hoxa2 24452 (Entrez Gene)
Chr4 q24 P31246 (UniProt | EBI)
NM_012581 (RefSeq)
LOC100911443 100911443 (Entrez Gene)
Chr4 XP_003752225 (RefSeq)
chimpanzee HOXA2 472322 (Entrez Gene)
Chr7 XP_527697 (RefSeq)
rhesus macaque HOXA2 700605 (Entrez Gene)
Chr3 XP_001092920 (RefSeq)
cattle HOXA2 524150 (Entrez Gene)
Chr4 Q0VCS4 (UniProt | EBI)
NM_001075854 (RefSeq)
dog HOXA2 609592 (Entrez Gene)
Chr14 XP_851905 (RefSeq)
chicken HOXA2 396055 (Entrez Gene)
Chr2 Q08727 (UniProt | EBI)
NM_205150 (RefSeq)
western clawed frog hoxa2 100038099 (Entrez Gene)
ChrUN XP_004915456 (RefSeq)
zebrafish hoxa2b 30325 (Entrez Gene)
Chr16 O42365 (UniProt | EBI)
NM_131106 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory