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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4860

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TSPAN9 HGNC:21640 (HGNC)
10867 (Entrez Gene)
613137 (OMIM)
HGNC homology
Chr12 p13.33-p13.32 Chr12:3077355-3286564 (+)
GRCh38.p7
O75954 (UniProt | EBI)
NM_006675 (RefSeq)
mouse Tspan9 MGI:1924558 (MGI)
109246 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 62.73 cM Chr6:127961396-128143594 (-)
GRCm38
ENSMUSG00000030352 (Ensembl Gene Model)
ENSMUSP00000115922 (Ensembl)
ENSMUST00000123786 (Ensembl)
rat Tspan9 312728 (Entrez Gene)
Chr4 q42 NP_001101360 (RefSeq)
NM_001107890 (RefSeq)
chimpanzee TSPAN9 746869 (Entrez Gene)
Chr12 XP_024203407 (RefSeq)
dog TSPAN9 612996 (Entrez Gene)
Chr27 XP_022266674 (RefSeq)
chicken TSPAN9 418263 (Entrez Gene)
Chr1 XP_015148494 (RefSeq)
zebrafish tspan9a 555341 (Entrez Gene)
Chr18 XP_682923 (RefSeq)
tspan9b 431733 (Entrez Gene)
Chr4 Q6GMK6 (UniProt | EBI)
NM_001002186 (RefSeq)
frog, western clawed tspan9 100144960 (Entrez Gene)
Chr3 B0BM39 (UniProt | EBI)
NM_001126530 (RefSeq)
macaque, rhesus TSPAN9 721790 (Entrez Gene)
Chr11 XP_028685000 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory