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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4836

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RPP40 HGNC:20992 (HGNC)
10799 (Entrez Gene)
606117 (OMIM)
RPP40 (MyGene.info)
HGNC homology
Chr6 p25.1 Chr6:4992405-5004063 (-)
GRCh38.p7
O75818 (UniProt | EBI)
NM_001286132 (RefSeq)
mouse Rpp40 MGI:1346084 (MGI)
208366 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 14.44 cM Chr13:35893472-35906359 (-)
GRCm38
ENSMUSG00000021418 (Ensembl Gene Model)
ENSMUSP00000130290 (Ensembl)
ENSMUST00000171686 (Ensembl)
rat Rpp40 291071 (Entrez Gene)
Chr17 p12 Q5BK64 (UniProt | EBI)
NM_001013055 (RefSeq)
chimpanzee RPP40 471844 (Entrez Gene)
Chr6 XP_016810344 (RefSeq)
cattle RPP40 531274 (Entrez Gene)
Chr23 A7YWU3 (UniProt | EBI)
NM_001105402 (RefSeq)
dog RPP40 478709 (Entrez Gene)
Chr35 XP_022270199 (RefSeq)
chicken RPP40 420876 (Entrez Gene)
Chr2 XP_025003435 (RefSeq)
zebrafish rpp40 415238 (Entrez Gene)
Chr2 NP_001002148 (RefSeq)
NM_001002148 (RefSeq)
frog, western clawed rpp40 779871 (Entrez Gene)
Chr6 NP_001072417 (RefSeq)
NM_001078949 (RefSeq)
macaque, rhesus RPP40 710505 (Entrez Gene)
Chr4 XP_028703690 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory