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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
48145

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAF1 HGNC:9829 (HGNC)
5894 (Entrez Gene)
164760 (OMIM)
Chr3 p25 Chr3:12583601-12664201 (-)
GRCh38
Leopard Syndrome 2
Noonan Syndrome 5; NS5
P04049 (UniProt | EBI)
NM_002880 (RefSeq)
mouse Raf1 MGI:97847 (MGI)
110157 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 53.62 cM Chr6:115618067-115676635 (-)
GRCm38
Noonan Syndrome 5; NS5
OTTMUSG00000020697 (VEGA)
OTTMUSP00000022608 (VEGA)
OTTMUST00000048983 (VEGA)
rat Raf1 24703 (Entrez Gene)
Chr4 q42 P11345 (UniProt | EBI)
NM_012639 (RefSeq)
chimpanzee RAF1 460182 (Entrez Gene)
Chr3 XP_516289 (RefSeq)
rhesus macaque RAF1 694725 (Entrez Gene)
Chr2 NP_001253231 (RefSeq)
NM_001266302 (RefSeq)
dog RAF1 484648 (Entrez Gene)
Chr20 XP_859234 (RefSeq)
chicken RAF1 396245 (Entrez Gene)
Chr12 P05625 (UniProt | EBI)
NM_205307 (RefSeq)
zebrafish raf1b 557109 (Entrez Gene)
Chr11 NP_001186684 (RefSeq)
NM_001199755 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory