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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
48044

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CDH4 HGNC:1763 (HGNC)
1002 (Entrez Gene)
603006 (OMIM)
CDH4 (MyGene.info)
HGNC homology
Chr20 q13.33 Chr20:61252426-61940617 (+)
GRCh38.p7
P55283 (UniProt | EBI)
NM_001794 (RefSeq)
mouse Cdh4 MGI:99218 (MGI)
12561 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 101.86 cM Chr2:179442431-179899373 (+)
GRCm38
ENSMUSG00000000305 (Ensembl Gene Model)
ENSMUSP00000000314 (Ensembl)
ENSMUST00000000314 (Ensembl)
rat Cdh4 114588 (Entrez Gene)
Chr3 q43 Q63149 (UniProt | EBI)
chimpanzee CDH4 743453 (Entrez Gene)
Chr20 XP_016793701 (RefSeq)
cattle CDH4 525796 (Entrez Gene)
Chr13 XP_002692306 (RefSeq)
dog CDH4 100685099 (Entrez Gene)
Chr24 XP_022264639 (RefSeq)
chicken CDH4 419222 (Entrez Gene)
Chr20 P24503 (UniProt | EBI)
NM_001004391 (RefSeq)
zebrafish cdh4 30297 (Entrez Gene)
Chr11 NP_001038738 (RefSeq)
NM_001045273 (RefSeq)
frog, western clawed cdh4 100144729 (Entrez Gene)
ChrUN NP_001116951 (RefSeq)
NM_001123479 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory