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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
48034

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATP2B4 HGNC:817 (HGNC)
493 (Entrez Gene)
108732 (OMIM)
Chr1 q32.1 Chr1:203626787-203744081 (+)
GRCh38
P23634 (UniProt | EBI)
NM_001001396 (RefSeq)
mouse Atp2b4 MGI:88111 (MGI)
381290 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 57.95 cM Chr1:133702678-133801041 (-)
GRCm38
OTTMUSG00000016442 (VEGA)
OTTMUSP00000017683 (VEGA)
OTTMUST00000039594 (VEGA)
rat Atp2b4 29600 (Entrez Gene)
Chr13 q13 Q64542 (UniProt | EBI)
NM_001005871 (RefSeq)
chimpanzee ATP2B4 457646 (Entrez Gene)
Chr1 XP_001156333 (RefSeq)
rhesus macaque ATP2B4 574317 (Entrez Gene)
Chr1 NP_001028098 (RefSeq)
NM_001032926 (RefSeq)
cattle ATP2B4 282146 (Entrez Gene)
Chr16 NP_001166065 (RefSeq)
NM_001172594 (RefSeq)
dog ATP2B4 403731 (Entrez Gene)
Chr38 XP_855748 (RefSeq)
chicken ATP2B4 419934 (Entrez Gene)
Chr26 XP_418055 (RefSeq)
zebrafish atp2b1b 561190 (Entrez Gene)
Chr25 NP_001129103 (RefSeq)
NM_001135631 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory