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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATP1A2 HGNC:800 (HGNC)
477 (Entrez Gene)
182340 (OMIM)
HGNC homology
Chr1 q23.2 Chr1:160115730-160143591 (+)
Alternating Hemiplegia of Childhood 1; AHC1
Migraine, Familial Hemiplegic, 2; FHM2
P50993 (UniProt | EBI)
NM_000702 (RefSeq)
mouse Atp1a2 MGI:88106 (MGI)
98660 (Entrez Gene)
Gene Tree
HGNC homology
Chr1 79.6 cM Chr1:172271709-172298064 (-)
OTTMUSG00000021834 (VEGA)
OTTMUSP00000024452 (VEGA)
OTTMUST00000051816 (VEGA)
rat Atp1a2 24212 (Entrez Gene)
Chr13 q24-q26 P06686 (UniProt | EBI)
NM_012505 (RefSeq)
chimpanzee ATP1A2 457432 (Entrez Gene)
Chr1 XP_009434625 (RefSeq)
rhesus macaque ATP1A2 720191 (Entrez Gene)
Chr1 NP_001252615 (RefSeq)
NM_001265686 (RefSeq)
cattle ATP1A2 515161 (Entrez Gene)
Chr3 A2VDL6 (UniProt | EBI)
NM_001081524 (RefSeq)
dog LOC488636 488636 (Entrez Gene)
Chr38 XP_545753 (RefSeq)
chicken ATP1A2 396468 (Entrez Gene)
ChrUN P24797 (UniProt | EBI)
NM_205476 (RefSeq)
western clawed frog atp1a2 100125050 (Entrez Gene)
ChrUN NP_001096439 (RefSeq)
NM_001102969 (RefSeq)
zebrafish atp1a2a 64609 (Entrez Gene)
Chr2 NP_571758 (RefSeq)
NM_131683 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.0
The Jackson Laboratory