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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATP1A2 HGNC:800 (HGNC)
477 (Entrez Gene)
182340 (OMIM)
ATP1A2 (MyGene.info)
HGNC homology
Chr1 q23.2 Chr1:160115730-160143591 (+)
alternating hemiplegia of childhood
familial hemiplegic migraine 2
P50993 (UniProt | EBI)
NM_000702 (RefSeq)
mouse Atp1a2 MGI:88106 (MGI)
98660 (Entrez Gene)
Gene Tree
HGNC homology
Chr1 79.6 cM Chr1:172271709-172298064 (-)
familial hemiplegic migraine
98660 (NCBI Gene Model)
Q6PIE5 (UniProt | EBI)
NM_178405 (RefSeq)
rat Atp1a2 24212 (Entrez Gene)
Chr13 q24 P06686 (UniProt | EBI)
NM_012505 (RefSeq)
chimpanzee ATP1A2 457432 (Entrez Gene)
Chr1 XP_016785778 (RefSeq)
cattle ATP1A2 515161 (Entrez Gene)
Chr3 A2VDL6 (UniProt | EBI)
NM_001081524 (RefSeq)
dog ATP1A4 488636 (Entrez Gene)
Chr38 XP_022271092 (RefSeq)
chicken ATP1A2 396468 (Entrez Gene)
ChrUN P24797 (UniProt | EBI)
NM_205476 (RefSeq)
zebrafish atp1a2a 64609 (Entrez Gene)
Chr2 NP_571758 (RefSeq)
NM_131683 (RefSeq)
frog, western clawed atp1a2 100125050 (Entrez Gene)
Chr8 NP_001096439 (RefSeq)
NM_001102969 (RefSeq)
macaque, rhesus ATP1A2 720191 (Entrez Gene)
Chr1 NP_001252615 (RefSeq)
NM_001265686 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory